Files in david-borchers/hmltm

Line transect estimation with hidden Markov availability models

R/HMMutils.R R/aic.R R/availutils.R R/bootstrap.R R/cppfuns.R R/datasets.R R/derviedfuns.R R/est.R R/fitting.R R/gof.R R/hess.R R/plotting.R R/simpleavail.R R/simulate.R R/utils.R README.md inst/BeakedWhaleExample.R inst/codebackup/HMMutils.R inst/codebackup/aic.R inst/codebackup/availutils.R inst/codebackup/bootstrap.R inst/codebackup/cppfuns.R inst/codebackup/datasets.R inst/codebackup/derviedfuns.R inst/codebackup/est.R inst/codebackup/fitting.R inst/codebackup/gof.R inst/codebackup/hess.R inst/codebackup/plotting.R inst/codebackup/simpleavail.R inst/codebackup/simulate.R inst/codebackup/utils.R inst/hmltm.R inst/hsltm2019_PATCH.R inst/installscript.r man/AIC.hmltm.Rd man/NDest.Rd man/Npars.from.lNpars.Rd man/aerial.survey.Rd man/beaked.hmm.pars.Rd man/beaked.ship.Rd man/bootstrap.p.with.Et.Rd man/bootstrap.p.with.hmm.Rd man/bootsum.Rd man/bootsum.p.Rd man/bowhead.adat.Rd man/bowhead.depths.Rd man/bowhead.hmm.pars.Rd man/bowhead.hmm.pars.bs.Rd man/bs.hmltm.Rd man/bsample.Rd man/calc.derived.Rd man/cdfy.u.Rd man/chisq.gof.y.Rd man/cv.Rd man/cv.avail.Rd man/est.hmltm.Rd man/f.plot.Rd man/fit.hmltm.Rd man/fit.xy.Rd man/fitted.esw.Rd man/fitted.esw1.Rd man/fitted.invesw.Rd man/fitted.invp.Rd man/fitted.invp1.Rd man/fitted.p.Rd man/fitted.px.Rd man/fxfit.plot.Rd man/fyfit.plot.Rd man/getruns.Rd man/gety.obs.Rd man/histline.Rd man/hmltm-package.Rd man/hmltm.esw.Rd man/hmltm.esw1.Rd man/hmltm.invp.Rd man/hmltm.p.Rd man/hmltm.px.Rd man/hmltm.stat.Rd man/hmmlt.gof.x.Rd man/hmmlt.gof.y.Rd man/hmmpars.boot.Rd man/hmmpars.paramtetric.boot.Rd man/instant.a.Rd man/inv.logit.Rd man/invHessvar.Rd man/invtfm.Rd man/is.nullmodel.Rd man/jeffa.Rd man/laake.a.Rd man/lnci.nmin.Rd man/logit.Rd man/make.covb.Rd man/make.hmm.pars.from.Et.Rd man/make.onesit.Rd man/make.survey.pars.Rd man/makeE.Rd man/makePi.Rd man/mclaren.a.Rd man/negllik.x.Rd man/negllik.xandy.Rd man/negllik.xy.Rd man/nm2m.Rd man/numericfy.Rd man/p.kolomogarov.Rd man/p.xy.Rd man/p.xy1.Rd man/parametric.resample.hmmpars.Rd man/poiss.equiv.Rd man/porpoise.hmm.pars.Rd man/resample.hmmpars.Rd man/richard.a.Rd man/simest.Rd man/simhmltm.Rd man/simhmltm.w.Rd man/simple.a.Rd man/simplea.Rd man/sintegral.Rd man/strat.estable.Rd man/sumsim.Rd man/tfm.Rd man/truncdat.Rd man/unvectorize.hmmpars.Rd man/vectorize.hmmpars.Rd vignettes/hmltmExercise.Rmd vignettes/hmltmExercise.pdf vignettes/hmltmExercise_solution.Rmd vignettes/hmltmExercise_solution.pdf vignettes/modelspec.pdf