Man pages for davidchampredon/GI
Generation intervals
| calc.Eall | Internal function. Calculate total exposed when m>1 in a... |
| calc.Iall | Internal function. Calculate total prevalence when n>1 in a... |
| calc.Jall | Internal function. Calculate total incidence when n>1 in a... |
| GI.bck | Internal function. Calculate the _backward_ generation... |
| GI.bck.discrete | Internal function. Calculate the _backward_ generation... |
| gi_ct_fit | Fit R0 and mean generation interval from contact tracing data |
| gi_ct_fit_mle2 | Fit R0 and mean generation interval from contact tracing data |
| gi.distrib | Internal function. Discrete generation interval distribution. |
| GI.fwd | Internal function. Calculate the _forward_ generation... |
| GI.fwd.discrete | Internal function. Calculate the _forward_ generation... |
| GI.intrinsic | Internal function. Calculate intrinsic generation interval... |
| GI.resude | Generation interval distribution for the RESuDe epidemic... |
| GI.seminr | Calculates the intrinsic, forward and backward generation... |
| nllk | Negative Log-Likelihood given R0 and mean generation interval... |
| RESuDe.simulate | Internal function. Simulation with the Renewal Equation with... |
| SEmInR.FX | Internal function. Simulate a SEmInR model. |
