nllk: Negative Log-Likelihood given R0 and mean generation interval...
In davidchampredon/GI: Generation intervals
Description
Negative Log-Likelihood given R0 and mean generation interval
assuming Poisson observation error from contact tracing data
Usage
1
nllk(R0, gimean, t.obs, gi.obs, model.epi, fxd.prm)
Arguments
t.obs
Numeric vector. Time when the backward generation intervals were observed
gi.obs
Numeric vector. Backward generation intervals observed.
model.epi
String. Epidemic model used. Choice between seminr or resude.
fxd.prm
List. Parameters of model.epi that are fixed.
davidchampredon/GI documentation built on May 14, 2019, 11:08 p.m.
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Description
Negative Log-Likelihood given R0 and mean generation interval assuming Poisson observation error from contact tracing data
Usage
1 | nllk(R0, gimean, t.obs, gi.obs, model.epi, fxd.prm)
|
Arguments
t.obs |
Numeric vector. Time when the backward generation intervals were observed |
gi.obs |
Numeric vector. Backward generation intervals observed. |
model.epi |
String. Epidemic model used. Choice between |
fxd.prm |
List. Parameters of |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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