nllk: Negative Log-Likelihood given R0 and mean generation interval...

Description Usage Arguments

Description

Negative Log-Likelihood given R0 and mean generation interval assuming Poisson observation error from contact tracing data

Usage

1
nllk(R0, gimean, t.obs, gi.obs, model.epi, fxd.prm)

Arguments

t.obs

Numeric vector. Time when the backward generation intervals were observed

gi.obs

Numeric vector. Backward generation intervals observed.

model.epi

String. Epidemic model used. Choice between seminr or resude.

fxd.prm

List. Parameters of model.epi that are fixed.


davidchampredon/GI documentation built on May 14, 2019, 11:08 p.m.