fetch_tf_activities: Transcription Factor activity with DoRothEA
In dbdimitrov/BugleSeq: BingleSeq RNA-Seq Data Analysis
Description
Usage
Arguments
Value
View source: R/bulk_footprintTab.R
Description
Transcription Factor activity with DoRothEA
Usage
1
fetch_tf_activities(de_data, reg_size, regulons, session)
Arguments
de_data
Table with de results and symbols for gene type
reg_size
minimun size of regulons
regulons
Dorothea regulons
session
currently running r session
Value
Returns a data frame with TF activities estimated from TF footprints
dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.
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Description Usage Arguments Value
View source: R/bulk_footprintTab.R
Description
Transcription Factor activity with DoRothEA
Usage
1 | fetch_tf_activities(de_data, reg_size, regulons, session)
|
Arguments
de_data |
Table with de results and symbols for gene type |
reg_size |
minimun size of regulons |
regulons |
Dorothea regulons |
session |
currently running r session |
Value
Returns a data frame with TF activities estimated from TF footprints
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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