dot-plotStateTrajectory_def: DEF: Visualizing the trajectory graph

In dcellwanger/CellTrails: Reconstruction, visualization and analysis of branching trajectories

Description

Visualizes the trajectory spanning all states of a component

Usage

.plotStateTrajectory_def(
  X,
  g,
  y,
  all_sts,
  name,
  setND = FALSE,
  point_size = 3,
  label_offset = 2
)

Arguments

X	Layout
g	State trajectory graph (igraph object)
y	Values; numeric or factor vector
all_sts	All state assignments
setND	If values of '0' are getting set to 'ND' in the figure legend
point_size	Point size paramenter
label_offset	Label offset parameter
label	Label for plot legend

Value

A ggplot object

Author(s)

Daniel C. Ellwanger

dcellwanger/CellTrails documentation built on May 12, 2020, 2:01 a.m.