superbPlot.pointjitterviolin: superbPlot point, jitter and violin plot layout

In dcousin3/superb: Summary Plots with Adjusted Error Bars

superbPlot point, jitter and violin plot layout

Description

superbPlot comes with a few built-in templates for making the final plots. All produces ggplot objects that can be further customized. Additionally, it is possible to add custom-make templates (see vignette 6). The functions, to be "superbPlot-compatible", must have these parameters:

Usage

superbPlot.pointjitterviolin(
  summarydata,
  xfactor,
  groupingfactor,
  addfactors,
  rawdata,
  pointParams = list(),
  jitterParams = list(),
  violinParams = list(),
  errorbarParams = list(),
  facetParams = list()
)

Arguments

summarydata	a data.frame with columns "center", "lowerwidth" and "upperwidth" for each level of the factors;
xfactor	a string with the name of the column where the factor going on the horizontal axis is given;
groupingfactor	a string with the name of the column for which the data will be grouped on the plot;
addfactors	a string with up to two additional factors to make the rows and columns panels, in the form "fact1 ~ fact2";
rawdata	always contains "DV" for each participants and each level of the factors
pointParams	(optional) list of graphic directives that are sent to the geom_bar layer
jitterParams	(optional) list of graphic directives that are sent to the geom_bar layer
violinParams	(optional) list of graphic directives that are sent to the geom_bar layer this modified geom_violin has additional options "direction"/"antagonize" and "push".
errorbarParams	(optional) list of graphic directives that are sent to the geom_superberrorbar layer
facetParams	(optional) list of graphic directives that are sent to the facet_grid layer

Value

a ggplot object

Examples

# This will make a plot with jittered points and violins for the overall distribution
superb(
   len ~ dose + supp,
   ToothGrowth, 
   plotStyle = "pointjitterviolin" 
)

# if you extract the data with superbData, you can 
# run this layout directly
#processedData <- superb(
#   len ~ dose + supp, 
#   ToothGrowth, 
#   showPlot = FALSE
#)
#
#superbPlot.pointjitterviolin(processedData$summaryStatistic,
#   "dose",
#   "supp",
#   ".~.",
#   processedData$rawData)

dcousin3/superb documentation built on Oct. 29, 2024, 5:28 p.m.