dd-harp/MicroMoB
Discrete Time Systems for Robust Analytics for Malaria Policy (RAMP), and Transmission Dynamics and Control of Mosquito-Borne Pathogens Transmission

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dd-harp/MicroMoB: Discrete Time Systems for Robust Analytics for Malaria Policy (RAMP), and Transmission Dynamics and Control of Mosquito-Borne Pathogens Transmission
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API for dd-harp/MicroMoB
Discrete Time Systems for Robust Analytics for Malaria Policy (RAMP), and Transmission Dynamics and Control of Mosquito-Borne Pathogens Transmission

Global functions
Abiotic Man page Source code
Abiotic.forced Man page Source code
Abiotic.null Man page Source code
AreaSpray Man page Source code
AreaSpray.null Man page Source code
AreaSprayEffectSizes Man page Source code
AreaSprayEffectSizes.null Man page Source code
AreaSprayEffects Man page Source code
AreaSprayEffects.null Man page Source code
AvailableBlood Man page Source code
AvailableBlood.forced Man page Source code
AvailableBlood.setup Man page Source code
AvailableBlood.static Man page Source code
AvailableHabitat Man page Source code
AvailableHabitat.forced Man page Source code
AvailableHabitat.simple Man page Source code
AvailableHabitat.static Man page Source code
AvailableSugar Man page Source code
AvailableSugar.forced Man page Source code
AvailableSugar.static Man page Source code
BedNetEffectSizes Man page Source code
BedNetEffectSizes.lemenach Man page Source code
BedNetEffectSizes.null Man page Source code
BedNetEffects Man page Source code
BedNetEffects.lemenach Man page Source code
BedNetEffects.null Man page Source code
Behavior Man page Source code
Behavior.forced Man page Source code
Behavior.null Man page Source code
Bionomics Man page Source code
Bionomics.Ldynamic Man page Source code
Bionomics.Mdynamic Man page Source code
Bionomics.dynamic Man page Source code
Bionomics.setup Man page Source code
Bionomics.static Man page Source code
Births Man page Source code
Births.zero Man page Source code
CareSeeking Man page Source code
CareSeeking.null Man page Source code
Civil Man page Source code
Civil.forced Man page Source code
Civil.null Man page Source code
Clinic Man page Source code
Clinic.null Man page Source code
Control Man page Source code
Control.forced Man page Source code
Control.null Man page Source code
Control.static Man page Source code
DTS_step Man page Source code
DTS_step_aquatic Man page Source code
DTS_step_cohort Man page Source code
DTS_step_human Man page Source code
DTS_step_mosy Man page Source code
Development Man page Source code
Development.null Man page Source code
DistributeBedNets Man page Source code
DistributeBedNets.null Man page Source code
EIP Man page Source code
EIP.fixed Man page Source code
EIP.null Man page Source code
EggLaying Man page Source code
EggLaying.dynamic Man page Source code
EggLaying.setup Man page Source code
EggLaying.simple Man page Source code
EggLaying.static Man page Source code
Emergence Man page Source code
Exposure Man page Source code
F_EIR Man page Source code
F_H Man page Source code
F_H.SIP Man page Source code
F_H.SIS Man page Source code
F_H.trace Man page Source code
F_X Man page Source code
F_X.SIP Man page Source code
F_X.SIS Man page Source code
F_X.trace Man page Source code
F_alpha Man page Source code
F_alpha.basic Man page Source code
F_alpha.trace Man page Source code
F_b Man page Source code
F_b.SIP Man page Source code
F_b.SIS Man page Source code
F_b.trace Man page Source code
F_beta Man page Source code
F_eggs Man page Source code
F_eggs.ENBRQ Man page Source code
F_eggs.Gtrace Man page Source code
F_eggs.RM Man page Source code
F_eggs.RMlumpy Man page Source code
F_eggs.Ztrace Man page Source code
F_eggs.basicM Man page Source code
F_f Man page Source code
F_f.dddn Man page Source code
F_f.static Man page Source code
F_f.type2 Man page Source code
F_foi Man page Source code
F_foi.nb Man page Source code
F_foi.pois Man page Source code
F_fqM Man page Source code
F_fqM.ENBRQ Man page Source code
F_fqM.Gtrace Man page Source code
F_fqM.RM Man page Source code
F_fqM.RMlumpy Man page Source code
F_fqM.Ztrace Man page Source code
F_fqM.basicM Man page Source code
F_fqZ Man page Source code
F_fqZ.ENBRQ Man page Source code
F_fqZ.Gtrace Man page Source code
F_fqZ.RM Man page Source code
F_fqZ.RMlumpy Man page Source code
F_fqZ.Ztrace Man page Source code
F_fqZ.basicM Man page Source code
F_kappa Man page Source code
F_nu Man page Source code
F_nu.dddn Man page Source code
F_nu.static Man page Source code
F_nu.type2 Man page Source code
F_p Man page Source code
F_p.dddn Man page Source code
F_p.static Man page Source code
F_pr Man page Source code
F_pr.SIP Man page Source code
F_pr.SIS Man page Source code
F_pr.trace Man page Source code
F_q Man page Source code
F_q.dddn Man page Source code
F_q.dynamic Man page Source code
F_q.static Man page Source code
F_sigma Man page Source code
F_sigma.dddn Man page Source code
F_sigma.static Man page Source code
F_tau Man page Source code
HTC Man page Source code
HTC.SIP Man page Source code
HTC.SIS Man page Source code
HabitatDynamics Man page Source code
HabitatDynamics.static Man page Source code
Hydrology Man page Source code
Hydrology.null Man page Source code
IRS_EffectSizes Man page Source code
IRS_EffectSizes.null Man page Source code
IRS_Effects Man page Source code
IRS_Effects.null Man page Source code
LBionomics Man page Source code
LBionomics.basic Man page Source code
LBionomics.trace Man page Source code
LSM_EffectSizes Man page Source code
LSM_EffectSizes.null Man page Source code
LSM_Effects Man page Source code
LSM_Effects.null Man page Source code
LocalFrac Man page Source code
LocalFrac.dynamic Man page Source code
LocalFrac.static Man page Source code
MBionomics Man page Source code
MBionomics.ENBRQ Man page Source code
MBionomics.Gtrace Man page Source code
MBionomics.RM Man page Source code
MBionomics.RMlumpy Man page Source code
MBionomics.Ztrace Man page Source code
MBionomics.basicM Man page Source code
MassMedical Man page Source code
MassMedical.forced Man page Source code
MassMedical.null Man page Source code
OtherBloodHosts Man page Source code
OtherBloodHosts.static Man page Source code
OviTraps Man page Source code
OviTraps.null Man page Source code
OwnBedNet Man page Source code
OwnBedNet.null Man page Source code
Rainfall Man page Source code
Rainfall.null Man page Source code
Relative_Humidity Man page Source code
Relative_Humidity.null Man page Source code
Resources Man page Source code
Resources.forced Man page Source code
Resources.setup Man page Source code
Resources.static Man page Source code
Shock Man page Source code
Shock.null Man page Source code
SprayHouses Man page Source code
SprayHouses.null Man page Source code
SugarBaitEffectSizes Man page Source code
SugarBaitEffectSizes.null Man page Source code
SugarBaitEffects Man page Source code
SugarBaitEffects.null Man page Source code
SugarBaits Man page Source code
SugarBaits.null Man page Source code
SugarDynamics Man page Source code
SugarDynamics.static Man page Source code
Temperature Man page Source code
Temperature.null Man page Source code
Transmission Man page Source code
Transmission.dynamic Man page Source code
Transmission.setup Man page Source code
Transmission.static Man page Source code
TreatHabitats Man page Source code
TreatHabitats.null Man page Source code
UseBedNet Man page Source code
UseBedNet.null Man page Source code
VectorControl Man page Source code
VectorControl.control Man page Source code
VectorControl.null Man page Source code
VectorControlEffectSizes Man page Source code
VectorControlEffectSizes.control Man page Source code
VectorControlEffectSizes.null Man page Source code
VectorControlEffects Man page Source code
VectorControlEffects.control Man page Source code
VectorControlEffects.null Man page Source code
Visitors Man page Source code
Visitors.basic Man page Source code
Visitors.static Man page Source code
Weather Man page Source code
Weather.forced Man page Source code
Weather.null Man page Source code
approx_equal Man page Source code
checkIt Man page Source code
check_abiotic Man page Source code
check_abiotic.forced Man page Source code
check_abiotic.null Man page Source code
check_civil Man page Source code
check_civil.forced Man page Source code
check_civil.null Man page Source code
compute_AvailableHabitat Man page Source code
compute_AvailableHosts Man page Source code
compute_EIR Man page Source code
compute_EIR_full Man page Source code
compute_EggsLaid Man page Source code
compute_NI Man page Source code
compute_NI_ix Man page Source code
compute_beta Man page Source code
compute_calU Man page Source code
compute_kappa Man page Source code
compute_local_frac Man page Source code
compute_terms Man page Source code
compute_terms.cohort Man page Source code
compute_terms.dts Man page Source code
compute_terms.human Man page Source code
compute_terms.na Man page Source code
compute_terms_steady Man page Source code
compute_vars_aqua Man page Source code
compute_vars_cohort Man page Source code
compute_vars_full Man page Source code
compute_vars_human Man page Source code
compute_vars_mosy Man page Source code
dHdt Man page Source code
dHdt.zero Man page Source code
dLdt Man page Source code
dLdt.basic Man page Source code
dLdt.trace Man page Source code
dMYZdt Man page Source code
dMYZdt.ENBRQ Man page Source code
dMYZdt.Gtrace Man page Source code
dMYZdt.RM Man page Source code
dMYZdt.RMlumpy Man page Source code
dMYZdt.Ztrace Man page Source code
dMYZdt.basicM Man page Source code
dXdt Man page Source code
dXdt.SIP Man page Source code
dXdt.SIS Man page Source code
dXdt.trace Man page Source code
diag_inverse Man page Source code
dts_lines_EIR Man page Source code
dts_lines_M Man page Source code
dts_lines_PR Man page Source code
dts_lines_X_SIP Man page Source code
dts_lines_X_SIS Man page Source code
dts_lines_YZ Man page Source code
dts_lines_YZ_fracs Man page Source code
dts_lines_Z_fracs Man page Source code
dts_lines_aEIR Man page Source code
dts_plot_EIR Man page Source code
dts_plot_M Man page Source code
dts_plot_PR Man page Source code
dts_plot_X Man page Source code
dts_plot_X.SIP Man page Source code
dts_plot_X.SIS Man page Source code
dts_plot_YZ Man page Source code
dts_plot_YZ_fracs Man page Source code
dts_plot_Z_fracs Man page Source code
dts_plot_aEIR Man page Source code
dts_setup Man page Source code
dts_setup_aquatic Man page Source code
dts_setup_cohort Man page Source code
dts_setup_human Man page Source code
dts_setup_mosy Man page Source code
dts_solve Man page Source code
dts_solve.aqua Man page Source code
dts_solve.cohort Man page Source code
dts_solve.dts Man page Source code
dts_solve.human Man page Source code
dts_solve.mosy Man page Source code
dts_stable_orbit Man page Source code
dts_steady Man page Source code
get_inits Man page Source code
get_inits_L Man page Source code
get_inits_L.basic Man page Source code
get_inits_L.trace Man page Source code
get_inits_MYZ Man page Source code
get_inits_MYZ.ENBRQ Man page Source code
get_inits_MYZ.Gtrace Man page Source code
get_inits_MYZ.RM Man page Source code
get_inits_MYZ.RMlumpy Man page Source code
get_inits_MYZ.Ztrace Man page Source code
get_inits_MYZ.basicM Man page Source code
get_inits_X Man page Source code
get_inits_X.SIP Man page Source code
get_inits_X.SIS Man page Source code
get_inits_X.trace Man page Source code
last_to_inits Man page Source code
list_MYZvars Man page Source code
list_MYZvars.ENBRQ Man page Source code
list_MYZvars.RM Man page Source code
list_MYZvars.RMlumpy Man page Source code
list_MYZvars.basicM Man page Source code
list_Xvars Man page Source code
list_Xvars.SIP Man page Source code
list_Xvars.SIS Man page Source code
make_Linits_basic Man page Source code
make_Lpar_basic Man page Source code
make_Lpar_trace Man page Source code
make_MYZinits_ENBRQ Man page Source code
make_MYZinits_RM Man page Source code
make_MYZinits_RMlumpy Man page Source code
make_MYZinits_basicM Man page Source code
make_MYZpar_ENBRQ Man page Source code
make_MYZpar_Gtrace Man page Source code
make_MYZpar_RM Man page Source code
make_MYZpar_RMlumpy Man page Source code
make_MYZpar_Ztrace Man page Source code
make_MYZpar_basicM Man page Source code
make_Omega Man page Source code
make_TaR Man page Source code
make_TimeSpent Man page Source code
make_TimeSpent.as_matrix Man page Source code
make_TimeSpent.athome Man page Source code
make_TimeSpent.xy Man page Source code
make_TimeSpent_athome Man page Source code
make_TimeSpent_xy Man page Source code
make_Xinits_SIP Man page Source code
make_Xinits_SIS Man page Source code
make_Xpar_SIP Man page Source code
make_Xpar_SIS Man page Source code
make_Xpar_trace Man page Source code
make_calK Man page Source code
make_calK.as_matrix Man page Source code
make_calK.herethere Man page Source code
make_calK.xy Man page Source code
make_calK_xy Man page Source code
make_calN Man page Source code
make_calU Man page Source code
make_calU_s Man page Source code
make_indices Man page Source code
make_indices_L Man page Source code
make_indices_L.basic Man page Source code
make_indices_L.trace Man page Source code
make_indices_MYZ Man page Source code
make_indices_MYZ.ENBRQ Man page Source code
make_indices_MYZ.Gtrace Man page Source code
make_indices_MYZ.RM Man page Source code
make_indices_MYZ.RMlumpy Man page Source code
make_indices_MYZ.Ztrace Man page Source code
make_indices_MYZ.basicM Man page Source code
make_indices_X Man page Source code
make_indices_X.SIP Man page Source code
make_indices_X.SIS Man page Source code
make_indices_X.trace Man page Source code
make_inits_L_basic Man page Source code
make_inits_L_trace Man page Source code
make_inits_MYZ_ENBRQ Man page Source code
make_inits_MYZ_Gtrace Man page Source code
make_inits_MYZ_RM Man page Source code
make_inits_MYZ_RMlumpy Man page Source code
make_inits_MYZ_Ztrace Man page Source code
make_inits_MYZ_basicM Man page Source code
make_inits_X_SIP Man page Source code
make_inits_X_SIS Man page Source code
make_inits_X_trace Man page Source code
make_parameters_L_basic Man page Source code
make_parameters_L_trace Man page Source code
make_parameters_MYZ_ENBRQ Man page Source code
make_parameters_MYZ_Gtrace Man page Source code
make_parameters_MYZ_RM Man page Source code
make_parameters_MYZ_RMlumpy Man page Source code
make_parameters_MYZ_Ztrace Man page Source code
make_parameters_MYZ_basicM Man page Source code
make_parameters_X_SIP Man page Source code
make_parameters_X_SIS Man page Source code
make_parameters_X_trace Man page Source code
make_parameters_demography_null Man page Source code
make_parameters_dts Man page Source code
metric_calD Man page Source code
metric_calR Man page Source code
metric_calV Man page Source code
metric_calZ Man page Source code
parse_dts_out Man page Source code
parse_dts_out_L Man page Source code
parse_dts_out_L.basic Man page Source code
parse_dts_out_L.trace Man page Source code
parse_dts_out_MYZ Man page Source code
parse_dts_out_MYZ.ENBRQ Man page Source code
parse_dts_out_MYZ.Gtrace Man page Source code
parse_dts_out_MYZ.RM Man page Source code
parse_dts_out_MYZ.RMlumpy Man page Source code
parse_dts_out_MYZ.Ztrace Man page Source code
parse_dts_out_MYZ.basicM Man page Source code
parse_dts_out_X Man page Source code
parse_dts_out_X.SIP Man page Source code
parse_dts_out_X.SIS Man page Source code
parse_dts_out_X.trace Man page Source code
parse_dts_out_vec Man page Source code
setup_BFpar_static Man page Source code
setup_BloodFeeding Man page Source code
setup_EGGpar_static Man page Source code
setup_EIP Man page Source code
setup_EIP.fixed Man page Source code
setup_EIP.null Man page Source code
setup_EggLaying_simple Man page Source code
setup_EggLaying_static Man page Source code
setup_Hpar_static Man page Source code
setup_Linits Man page Source code
setup_Linits.basic Man page Source code
setup_Linits.trace Man page Source code
setup_Lpar Man page Source code
setup_Lpar.basic Man page Source code
setup_Lpar.trace Man page Source code
setup_MYZinits Man page Source code
setup_MYZinits.ENBRQ Man page Source code
setup_MYZinits.Gtrace Man page Source code
setup_MYZinits.RM Man page Source code
setup_MYZinits.RMlumpy Man page Source code
setup_MYZinits.Ztrace Man page Source code
setup_MYZinits.basicM Man page Source code
setup_MYZpar Man page Source code
setup_MYZpar.ENBRQ Man page Source code
setup_MYZpar.Gtrace Man page Source code
setup_MYZpar.RM Man page Source code
setup_MYZpar.RMlumpy Man page Source code
setup_MYZpar.Ztrace Man page Source code
setup_MYZpar.basicM Man page Source code
setup_Xinits Man page Source code
setup_Xinits.SIP Man page Source code
setup_Xinits.SIS Man page Source code
setup_Xinits.trace Man page Source code
setup_Xpar Man page Source code
setup_Xpar.SIP Man page Source code
setup_Xpar.SIS Man page Source code
setup_Xpar.trace Man page Source code
setup_abiotic_forced Man page Source code
setup_abiotic_null Man page Source code
setup_area_spray_null Man page Source code
setup_behavior Man page Source code
setup_behavior.forced Man page Source code
setup_behavior.null Man page Source code
setup_behavior_forced Man page Source code
setup_behavior_null Man page Source code
setup_bionomics_static Man page Source code
setup_care_seeking_null Man page Source code
setup_civil_forced Man page Source code
setup_civil_null Man page Source code
setup_clinic_forced Man page Source code
setup_clinic_null Man page Source code
setup_control Man page Source code
setup_control.forced Man page Source code
setup_control.null Man page Source code
setup_control_forced Man page Source code
setup_control_null Man page Source code
setup_development_null Man page Source code
setup_eip_fixed Man page Source code
setup_eip_null Man page Source code
setup_exposure_nb Man page Source code
setup_exposure_pois Man page Source code
setup_habitat_dynamics_static Man page Source code
setup_hydrology_null Man page Source code
setup_irs_null Man page Source code
setup_itn_lemenach Man page Source code
setup_itn_null Man page Source code
setup_local_fraction_simple Man page Source code
setup_lsm_null Man page Source code
setup_mass_medical_forced Man page Source code
setup_mass_medical_null Man page Source code
setup_other_blood_hosts_static Man page Source code
setup_ovitraps_null Man page Source code
setup_rainfall_null Man page Source code
setup_relative_humidity_null Man page Source code
setup_resources_forced Man page Source code
setup_resources_null Man page Source code
setup_resources_static Man page Source code
setup_shock_null Man page Source code
setup_sugar_baits_null Man page Source code
setup_sugar_static Man page Source code
setup_temperature_null Man page Source code
setup_travel_eir Man page Source code
setup_travel_foi Man page Source code
setup_travel_static Man page Source code
setup_vc_control Man page Source code
setup_vc_null Man page Source code
setup_visitors_basic Man page Source code
setup_visitors_static Man page Source code
setup_weather_forced Man page Source code
setup_weather_null Man page Source code
shapeIt Man page Source code
travel_malaria Man page Source code
travel_malaria.eir Man page Source code
travel_malaria.foi Man page Source code
travel_malaria.static Man page Source code
update_inits Man page Source code
update_inits_L Man page Source code
update_inits_L.basic Man page Source code
update_inits_L.trace Man page Source code
update_inits_MYZ Man page Source code
update_inits_MYZ.ENBRQ Man page Source code
update_inits_MYZ.Gtrace Man page Source code
update_inits_MYZ.RM Man page Source code
update_inits_MYZ.RMlumpy Man page Source code
update_inits_MYZ.Ztrace Man page Source code
update_inits_MYZ.basicM Man page Source code
update_inits_X Man page Source code
update_inits_X.SIP Man page Source code
update_inits_X.SIS Man page Source code
update_inits_X.trace Man page Source code
dd-harp/MicroMoB documentation built on June 6, 2024, 4:43 p.m.

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