GCGplot_bioreps: Wrap individual biological replicates to spot-check
In ddebrauske/GCG: Growth Curve Generator: Process and Analyze Plate Reader Experiments
Description
Subsets each biological replicate and plots a facet_wrap with every condition. this allows you to spot check the biological reps to see if there is any obvious problems.
Usage
1
GCGplot_bioreps(data.combined, graphic.title, out.dir)
Arguments
data.combined
tidy, long dataframe with columns "Coordinate", "plate.name", "Time", "OD600", "Strain", "Condition", "Bio_rep" – from TimeseriesLayoutBlank function
graphic.title
what you would like to title this graphic
out.dir
output directory: path to the folder where you would like to store these pictures – should end in "/". for working directory, use "./"
ddebrauske/GCG documentation built on Aug. 8, 2021, 5:22 p.m.
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Description
Subsets each biological replicate and plots a facet_wrap with every condition. this allows you to spot check the biological reps to see if there is any obvious problems.
Usage
1 | GCGplot_bioreps(data.combined, graphic.title, out.dir)
|
Arguments
data.combined |
tidy, long dataframe with columns "Coordinate", "plate.name", "Time", "OD600", "Strain", "Condition", "Bio_rep" – from TimeseriesLayoutBlank function |
graphic.title |
what you would like to title this graphic |
out.dir |
output directory: path to the folder where you would like to store these pictures – should end in "/". for working directory, use "./" |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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