SuperAUC: Super! Area Under The Curve - AUC summary of many curves
In ddebrauske/GCG: Growth Curve Generator: Process and Analyze Plate Reader Experiments
Description
Usage
Arguments
Value
Description
takes combined data from TimeseriesLayoutBlank, or data with same format and finds AUC for each curve. Requires my GCG::eAUC function!
Usage
1
Arguments
combined.data
data.frame: a tidy,long data with columns "Coordinate", "plate.name", "Time", "OD600", "Strain", "Condition", "Bio_rep" – from TimeseriesLayoutBlank function
plot
logical: would you like to plot the results with ggplot? plots will include biological replicate points plotted with mean and SE. technical reps -identically identified conditiosn within the same "Bio Rep" will be averaged. defaults to FALSE.
Value
returns a table of AUC values linked to the corresponding wells
ddebrauske/GCG documentation built on Aug. 8, 2021, 5:22 p.m.
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Description Usage Arguments Value
Description
takes combined data from TimeseriesLayoutBlank, or data with same format and finds AUC for each curve. Requires my GCG::eAUC function!
Usage
1 |
Arguments
combined.data |
data.frame: a tidy,long data with columns "Coordinate", "plate.name", "Time", "OD600", "Strain", "Condition", "Bio_rep" – from TimeseriesLayoutBlank function |
plot |
logical: would you like to plot the results with ggplot? plots will include biological replicate points plotted with mean and SE. technical reps -identically identified conditiosn within the same "Bio Rep" will be averaged. defaults to FALSE. |
Value
returns a table of AUC values linked to the corresponding wells
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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