GCGplot_matrices: Display curves from all wells

In ddebrauske/GCG: Growth Curve Generator: Process and Analyze Plate Reader Experiments

Description

Plots each curve individually, plotting each plate as one facet_wrap matrix, in 96 well format. this allows for manual spot-checking of technical replicates and individual wells.

Usage

GCGplot_matrices(
  data.combined.summarized,
  graphic.title,
  out.dir,
  matrix.columns = 12
)

Arguments

data.combined.summarized	tidy, long dataframe with columns "Coordinate", "plate.name", "Time", "OD600", "Strain", "Condition", "Bio_rep" – from TimeseriesLayoutBlank function
graphic.title	what you would like to title this graphic
out.dir	output directory: path to the folder where you would like to store these pictures – should end in "/". for working directory, use "./"
matrix.columns	how many columns does your plate have? Numeric. Defaults to 12 for 96well plate

ddebrauske/GCG documentation built on Aug. 8, 2021, 5:22 p.m.