Man pages for ddeweerd/MODifieRDB
MODifieRDB
| build_clique_db_db | Clique DB function wrapper |
| clique_sum_db | Clique SuM function wrapper |
| connect_to_db | Connect to database |
| correlation_clique_db | correlation_clique function wrapper |
| delete_input_object | Delete an input object from the database |
| delete_module_object | Delete a module object from database by module_name |
| diamond_db | diamond function wrapper |
| diffcoex_db | DiffCoEx function wrapper |
| disconnect_db | Disconnect from database |
| get_available_db_networks | Get all names from PPI networks present in the database |
| get_available_input_objects | Get all names from input objects present in the database |
| get_available_module_objects | Get the names of all module objects in the database |
| get_available_networks | Get the names of all PPI networks available in database |
| get_unique_genes | Get all unique genes present in the database |
| mcode_db | MCODE function wrapper |
| moda_db | moda function wrapper |
| MODifieR_input_from_db | Retrieve an input object from the database by input_name |
| MODifieR_module_from_db | Retrieve an module object from the database by module_name |
| MODifieR_object_to_db | Stores a MODifieR object in the database |
| modulediscoverer_db | Module Discoverer function wrapper |
| ppi_network_from_db | Retrieve a PPI network from database by ppi_name |
| ppi_network_to_db | Store a PPI network in the database |
| wgcna_db | wgcna function wrapper |
