PlotHeatmap: Build heatmap object
In debsin/dropClust: Single Cell Transcriptome Analysis
Description
Usage
Arguments
Value
Description
Produces custom heatmap uses pheatmap::pheatmap().
Usage
1
PlotHeatmap(object, DE_res, selected_clusters = NA, nDE = 10)
Arguments
object
SingleCellExperiment object
DE_res
list obtained from the FindMarkers module.
selected_clusters
vector of selected clusters to be considered. When unspecified (=NA), defaults to all predicted clusters.
nDE
integer, specifies the number of DE genes to appear in the heatmap.
Value
heatmap object.
debsin/dropClust documentation built on Nov. 4, 2019, 10:22 a.m.
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Description Usage Arguments Value
Description
Produces custom heatmap uses pheatmap::pheatmap().
Usage
1 | PlotHeatmap(object, DE_res, selected_clusters = NA, nDE = 10)
|
Arguments
object |
SingleCellExperiment object |
DE_res |
list obtained from the |
selected_clusters |
vector of selected clusters to be considered. When unspecified (=NA), defaults to all predicted clusters. |
nDE |
integer, specifies the number of DE genes to appear in the heatmap. |
Value
heatmap object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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