wTO.Consensus: wTO.Consensus

In deisygysi/wTO: Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network

wTO.Consensus

Description

Consensus requires a list of data.frame containing the pair of nodes, and the wTO values for all networks that need to be joined. Reference: arXiv:1711.04702

Usage

wTO.Consensus(data)

Arguments

data	list of data.frame containing the "Node.1", "Node.2" and "wTO".

Author(s)

Deisy Morselli Gysi <deisy at bioinf.uni-leipzig.de>

Examples

## Not run: 
EXAMPLE =  wTO.Complete( k =1, n = 200, Data = Microarray_Expression1,
                                      Overlap = ExampleGRF$x, method = "p")

# Constructing the consensus network
data = list(data.frame(Node.1 = EXAMPLE$wTO$Node.1,
Node.2 = EXAMPLE$wTO$Node.2,
wto_sig = EXAMPLE$wTO$wTO_sign,
pvalsig = EXAMPLE$wTO$pval_sig),
data.frame(Node.1 = EXAMPLE$wTO$Node.1,
Node.2 = EXAMPLE$wTO$Node.2,
wtoabs = EXAMPLE$wTO$wTO_abs,
pvalabs = EXAMPLE$wTO$pval_abs) )
CONS = wTO.Consensus(data)


## End(Not run)

deisygysi/wTO documentation built on May 25, 2022, 2:46 a.m.