wTO.aux.each: wTO.aux.each

In deisygysi/wTO: Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network

wTO.aux.each

Description

wTO.aux.each calculate the wTO for each one of the resamplings.

Usage

wTO.aux.each(n, Data, Overlap, method, method_resampling, lag, ID)

Arguments

n	Number of bootstraps / reshuffles to be run for the estimates of the "Threshold" or "pval".
Data	data.frame containing the count / expression data for the correlation.
Overlap	Nodes of interested, where the Overlapping weights will be computed.
method	Type of the correlation that should be used. "s" / "spearman" will compute the rank spearman correlation, "p" / "pearson" will compute the linear correlation. If no value is given, the default is to use "s".
method_resampling	method of the resampling. Bootstrap or Reshuffle. Bootstrap null hypothesis is that the wTO is random, and Reshuffle tests if the wTO is equal to zero.

deisygysi/wTO documentation built on May 25, 2022, 2:46 a.m.