Files in demar01/protrusionproteome
protrusionproteome
.RData
.Rbuildignore
.Rhistory
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/ZZZ.R
R/data.R
R/enrich_1D.R
R/filter_MaxQuant.R
R/make_TMT_se.R
R/make_unique.R
R/plot_labelingefficiency.R
R/plot_miscleavagerate.R
R/plot_scatter.R
README.md
_pkgdown.yml
data/evidence.raw.rda
data/peptides.raw.rda
data/prot.raw.rda
docs/404.html
docs/articles/index.html
docs/articles/protrusionproteome.html
docs/articles/protrusionproteome_BC.html
docs/articles/protrusionproteome_BC_files/figure-html/plot-labelingefficiency-1.png
docs/articles/protrusionproteome_BC_files/figure-html/plot-miscleavages-1.png
docs/articles/protrusionproteome_BC_files/figure-html/plot-scatter-1.png
docs/articles/protrusionproteome_BC_files/header-attrs-2.6/header-attrs.js
docs/articles/protrusionproteome_files/figure-html/plot-labelingefficiency-1.png
docs/articles/protrusionproteome_files/figure-html/plot-miscleavages-1.png
docs/articles/protrusionproteome_files/figure-html/plot-scatter-1.png
docs/articles/protrusionproteome_files/header-attrs-2.6/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/enrich_1D.html
docs/reference/evidence.raw.html
docs/reference/figures/hexsticker.R
docs/reference/figures/protrusionproteome_hex.png
docs/reference/filter_MaxQuant.html
docs/reference/index.html
docs/reference/make_TMT_se.html
docs/reference/make_unique.html
docs/reference/peptides.raw.html
docs/reference/plot_labelingefficiency.html
docs/reference/plot_miscleavagerate.html
docs/reference/plot_scatter.html
docs/reference/prot.raw.html
inst/CITATION
inst/NEWS.md
inst/extdata/allPeptides_identified.txt
inst/extdata/evidence.txt
inst/scripts/data.R
man/enrich_1D.Rd
man/evidence.raw.Rd
man/figures/hexsticker.R
man/figures/protrusionproteome_hex.png
man/filter_MaxQuant.Rd
man/make_TMT_se.Rd
man/make_unique.Rd
man/peptides.raw.Rd
man/plot_labelingefficiency.Rd
man/plot_miscleavagerate.Rd
man/plot_scatter.Rd
man/prot.raw.Rd
protrusionproteome.Rproj
tests/testthat.R
tests/testthat/test-enrich_1D.R
tests/testthat/test-filter_MaxQuant.R
tests/testthat/test-make_TMT_se.R
tests/testthat/test-plot_labelingefficiency.R
tests/testthat/test-plot_miscleavagerate.R
tests/testthat/test-plot_scatter.R
tests/testthat/test-randomtest.R
tests/testthat/test-unique_TMT_se.R
vignettes/protrusionproteome.Rmd
vignettes/protrusionproteome.bib
