Description Usage Arguments Value Examples
enrich_1D
tests for deferentially enriched proteins (1D enrichment).
1 2 3 4 5 6 | enrich_1D(
se,
timepoint = 5,
dbs = "GO_Molecular_Function_2018",
number_dbs = 1
)
|
se |
SummarizedExperiment, Data object containing processed proteomics data |
timepoint |
integer Timepoint to do enrichment analysis |
dbs |
Character Character vector of databases to search |
number_dbs |
integer |
A tibble with enrichment terms, p-values etc
1 2 3 | if(interactive()){
enrichment_table <- enrich_1D(se,timepoint= 5, dbs ="GO_Molecular_Function_2018",number_dbs=1)
}
|
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