protrusionproteome: protrusionproteome

plot_scatter generates a scatterplot for two conditions of interest highlighting a given category of interest.

1	plot_scatter(se, xpos, ypos, category, color_highlight, xlimit, ylimit)

`se`	SummarizedExperiment, Data object containing processed proteomics data
`xpos`	Integer, Timepoint to represent on the x axis on the scatterplot
`ypos`	Integer, Timepoint to represent on the y axis on the scatterplot
`category`	Character, Sets the proteins to highlight in the plot
`color_highlight`	Character, Sets the color of category to highlight in the plot
`xlimit`	Character, Sets the limit of x axis on the scatterplot
`ylimit`	Character, Sets the limit of y axis on the scatterplot

A scatter plot (generated by ggplot)

1
2
3

if(interactive()){
plot_scatter(se, 1, 2, "HIST", 'orange', 4, 4)
}

demar01/protrusionproteome documentation built on April 29, 2021, 5:47 a.m.

demar01/protrusionproteome index

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description