filter_MaxQuant: Filter proteinGroups table by rows

In demar01/protrusionproteome: protrusionproteome

Description

filter_MaxQuant imports a proteinGroups table from MaxQuant and filter rows with a '+' on columns to filter provided by user.

Usage

filter_MaxQuant(proteins, tofilter)

Arguments

proteins	Data.frame, Protein table originating from MaxQuant.
tofilter	Character, Name of the column(s) containing features to be filtered on.

Value

dataframe

Examples

if(interactive()){
proteins_filtered <- filter_MaxQuant(prot.raw,
tofilter= c("Reverse" , "Potential.contaminant" ,"Only.identified.by.site"))

}

demar01/protrusionproteome documentation built on April 29, 2021, 5:47 a.m.