Man pages for dempsey-CMAR/tgc
Thermal Growth Coefficient Model for Aquaculture
| apply_dd_filters | Apply filters to prepare data for degree-day calculation |
| calc_mode | Extract the most common value in a vector |
| calculate_event_duration | Calculate the duration of time VALUE exceeds a threshold... |
| check_for_data_gaps | Check for substantial gaps in the time series |
| count_degree_days | Count number of degree-days |
| count_growing_days | Count number of days that were suitable for growth |
| count_max_event_days | Count the maximum number of days VALUE exceeds a threshold... |
| create_station_label | Assign a label in the form Station Name Long Season |
| filter_in_growing_seasons | Keep observations that occur during growing seasons |
| filter_in_growing_seasons_single | Keep observations that occur during growing seasons |
| filter_out_heat_stress_events | Filter out observations that occur during heat stress events |
| filter_out_heat_stress_events_single | Filter out observations that occur during heat stress events |
| identify_first_superchill | Identify when VALUE first crosses below a threshold |
| identify_growing_seasons | Identify start and end of growing seasons for each year |
| identify_heat_stress_events | Identify start and end of non-overlapping heat stress events |
| identify_heat_stress_intervals | Identify n-hour intervals beginning when a threshold is... |
| identify_trending_up | Identify when VALUE begins trending up |
| plot_degree_days | Plot degree days at depth for each season start date |
| plot_filtered_data | Plot filtered data with removed data greyed out |
| plot_temperature_at_depth | Plot temperature coloured by depth |
| string_data | Example temperature data |
| TGC_calculate_coefficent | Calculate the thermal growth coefficient |
| TGC_calculate_degree_days | Use TGC model to calculate degree days required to grow from... |
| TGC_calculate_final_weight | Calculate final body weight using TGC model |
| TGC_calculate_initial_weight | Calculate initial body weight using TGC model |
