fishMO2-package: Calculate and plot the standard metabolic rate (SMR), the...
In denis-chabot/fishMO2: Calculate and Plot SMR, O2crit and SDA, and convert between oxygen units
Description
Author(s)
References
Description
Package to calculate and plot the metabolic rate of water-breathers such as
fish and crustaceans. In particular, functions are provided to calculate
the Standard Metabolic Rate (SMR) from multiple measurements of oxygen
uptake obtained from a single animal. In experiments where ambient
dissolved oxygen was slowly decreased until the animal could no longer
sustain its SMR, O2crit can be calculated. Specific Dynamic Action (SDA)
can also be calculated and plotted for experiments measuring oxygen uptake
before and after a meal. Conversion between different oxygen concentration
units is provided, functions to calculate oxygen solubility and saturation
values will be added soon.
Author(s)
Denis Chabot
Maintainer: Denis Chabot chabot.denis@gmail.com
References
Chabot, D., Steffensen, J. F. and Farrell, A. P. (2016) The
determination of the standard metabolic rate in fishes. Journal of
Fish Biology 88, 81-121.
Claireaux, Guy and Chabot, Denis (2016) Responses by fishes to
environmental hypoxia: integration through Fry's concept of aerobic
metabolic scope. Journal of Fish Biology 88, 232-251.
doi:doi:10.1111/jfb.1283
denis-chabot/fishMO2 documentation built on July 16, 2020, 1:53 a.m.
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Description Author(s) References
Description
Package to calculate and plot the metabolic rate of water-breathers such as fish and crustaceans. In particular, functions are provided to calculate the Standard Metabolic Rate (SMR) from multiple measurements of oxygen uptake obtained from a single animal. In experiments where ambient dissolved oxygen was slowly decreased until the animal could no longer sustain its SMR, O2crit can be calculated. Specific Dynamic Action (SDA) can also be calculated and plotted for experiments measuring oxygen uptake before and after a meal. Conversion between different oxygen concentration units is provided, functions to calculate oxygen solubility and saturation values will be added soon.
Author(s)
Denis Chabot
Maintainer: Denis Chabot chabot.denis@gmail.com
References
Chabot, D., Steffensen, J. F. and Farrell, A. P. (2016) The determination of the standard metabolic rate in fishes. Journal of Fish Biology 88, 81-121.
Claireaux, Guy and Chabot, Denis (2016) Responses by fishes to environmental hypoxia: integration through Fry's concept of aerobic metabolic scope. Journal of Fish Biology 88, 232-251. doi:doi:10.1111/jfb.1283
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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