denisagniel/tcgsaseq: Time-Course Gene Set Analysis for RNA-Seq Data
Version 1.7.2

Analyze RNA-seq data with variance component score test accounting for data heteroscedasticity through precision weights. Perform both gene-wise and gene set analyses, and can deal with longitudinal data. Method is detailed in: Agniel D & Hejblum BP (2017) Variance component score test for time-course gene set analysis of longitudinal RNA-seq data, Biostatistics, 18(4):589-604.

Getting started

Package details

LicenseGPL-2 | file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
denisagniel/tcgsaseq documentation built on July 20, 2018, 3:15 a.m.