API for deruncie/GridLMM
Efficient Mixed Models for GWAS with multiple Random Effects

Global functions
F_hats Source code
GridLMM Man page
GridLMM-package Man page
GridLMM_GWAS Man page Source code
GridLMM_ML Man page Source code
GridLMM_SS_downdate_matrix Source code
GridLMM_SS_matrix Source code
GridLMM_posterior Man page Source code
GridLMMnet Man page Source code
GridLMMnet_setup Source code
build_downdate_Xs Source code
calc_LL Source code
calc_LL_parallel Source code
calc_ML Source code
calc_REML Source code
calculate_Grid Source code
chol_c Source code
chol_dropRows Source code
chol_update Source code
chol_update_L Source code
clean_V_folder Source code
collect_results_GridLMMnet Source code
combine_LDAK_Kinships Source code
compile_results Source code
crossprod_cholR Source code
fit_GridLMM_GWAS Source code
get_LL Source code
get_current_h2s Source code
get_h2_LDAK Source code
get_h2s_ball Source code
get_h2s_to_test Source code
get_lambda_sequence Source code
log_det_of_XtX Source code
make_V_setup Source code
make_chol_V_setup Source code
make_h2s_matrix Source code
my_detectCores Man page Source code
premultiply_list_of_matrices Source code
prepMM Source code
prep_LDAK_Kinship Man page Source code
qq_p_plot Source code
run_GridLMM_GWAS Source code
run_GridLMMnet Source code
run_glmnet_V Source code
scale_SNPs Source code
set_p_test Man page Source code
setup_Grid Source code
start_cluster Source code
stop_cluster Source code
svd_c Source code
deruncie/GridLMM documentation built on Aug. 26, 2018, 9:31 p.m.