set_p_test | R Documentation |
For GRMs created as X'X, it can be useful to remove "proximal" markers from the GRM when testing a focal marker.
To do this in GridLMM, we need to know p
(how many markers were in the original GRM), and p_test
,
how many markers are to be removed for a typical test
set_p_test(V_setup, p_test = NULL, p = NULL)
V_setup |
A list of setup variables, as returned by a GridLMM function |
p_test |
A named vector with names corresponding to random effects in the model (as found in |
p |
A named vector as for |
The modified V_setup
list
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