Bootstrap_LOOCV_LR_AUC: Bootstrap on Leave-one-out CV with Logistic Regression.
In dfjenkins3/TBSignatureProfiler: Profile RNA-Seq Data Using TB Pathway Signatures

Bootstrap_LOOCV_LR_AUC

R Documentation

Bootstrap on Leave-one-out CV with Logistic Regression.

Bootstrap on Leave-one-out CV with Logistic Regression.

Bootstrap_LOOCV_LR_AUC(df, targetVec, nboot)

`df`	a `data.frame` of gene expression count data. Required.
`targetVec`	a binary vector of the response variable. Should be the same number of rows as `df`. Required.
`nboot`	an integer specifying the number of bootstrap iterations.

A list of length 2 with elements

`auc`	A vector the length of `nboot` with the AUC from each bootstrap iteration.
`byClass`	A dataframe with number of rows equal to `nboot`. Each row contains the sensitivity, specificity, positive predictive value, negative predictive value, precision, recall, F1, prevalence, detection rate, detection prevalence and balanced accuracy for that bootstrap iteration.