dhelekal/mmdiff3: Statistical Testing for ChIP-Seq data sets

This package detects statistically significant differences between read enrichment profiles in different ChIP-Seq samples. To take advantage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD).

Getting started

Package details

AuthorGabriele Schweikert [cre, aut], David Kuo [aut]
Bioconductor views ChIPSeq DifferentialPeakCalling Sequencing Software
MaintainerGabriele Schweikert <gschweik@staffmail.ed.ac.uk>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
dhelekal/mmdiff3 documentation built on July 25, 2019, 8:18 p.m.