countCpGIslands: Calculates the number of CpG islands in a DNA strand and...
In diannamcallister/MethylExpress: Visual investigation of physical characteristics of methylation of DNA
Description
Usage
Arguments
Details
Value
View source: R/findCpGIslands.R
Description
A helper function that returns the file who contains markdown of the DNA
strand with the CpG islands highlighted, as well as the number of CpG
islands in the DNA strand
Usage
1
countCpGIslands(nucleotides)
Arguments
nucleotides
A string of nucleotides in a DNA strand
Details
This function is an internal function and therefore cannot be used directly
when installing this package - it is instead a helper function for
findCpGIslands
Value
The number of CpG islands found and a file that shows where the islands are in the DNA strand
file - A string value for the file where the markdown text can be found
numIslands - An integer value for the amount of CpG islands found
diannamcallister/MethylExpress documentation built on Dec. 31, 2020, 11:19 p.m.
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Description Usage Arguments Details Value
View source: R/findCpGIslands.R
Description
A helper function that returns the file who contains markdown of the DNA strand with the CpG islands highlighted, as well as the number of CpG islands in the DNA strand
Usage
1 | countCpGIslands(nucleotides)
|
Arguments
nucleotides |
A string of nucleotides in a DNA strand |
Details
This function is an internal function and therefore cannot be used directly when installing this package - it is instead a helper function for findCpGIslands
Value
The number of CpG islands found and a file that shows where the islands are in the DNA strand
file - A string value for the file where the markdown text can be found
numIslands - An integer value for the amount of CpG islands found
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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