findMatchingSections: Generate a markdown file with all methylated cytosines...
In diannamcallister/MethylExpress: Visual investigation of physical characteristics of methylation of DNA
Description
Usage
Arguments
Details
Value
View source: R/findMethylatedCytosines.R
Description
A helper function that returns a markdown file of the two input DNA strands,
where each cytosine that was methylated is highlighted
Usage
1
findMatchingSections(orig, bisulfite)
Arguments
orig
A string of nucleotides of the original DNA sequence with no
modifications, meaning before bisulfite conversion
bisulfite
A string of nucleotides of the DNA sequence after bisulfite
conversion
Details
This function is an internal function and therefore cannot be used directly
when installing this package - it is instead a helper function for
findMethylatedCytosines
Value
A file containing the two input DNA strands, where the methylated
cytosines are highlighted.
diannamcallister/MethylExpress documentation built on Dec. 31, 2020, 11:19 p.m.
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Description Usage Arguments Details Value
View source: R/findMethylatedCytosines.R
Description
A helper function that returns a markdown file of the two input DNA strands, where each cytosine that was methylated is highlighted
Usage
1 | findMatchingSections(orig, bisulfite)
|
Arguments
orig |
A string of nucleotides of the original DNA sequence with no modifications, meaning before bisulfite conversion |
bisulfite |
A string of nucleotides of the DNA sequence after bisulfite conversion |
Details
This function is an internal function and therefore cannot be used directly when installing this package - it is instead a helper function for findMethylatedCytosines
Value
A file containing the two input DNA strands, where the methylated cytosines are highlighted.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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