getSeq: getSeq

Description Usage Arguments Value Examples

View source: R/getAlign.R

Description

Get the corresponding species' gene sequence.

Usage

1
getSeq(tree, phydat, spe, speNum)

Arguments

tree

a phylogenetic tree

phydat

phydat object containing corresponding sequences

spe

name of species

speNum

optional: node (for ancestral reconstruction of internal nodes w/o species names)

Value

sequence

Examples

1
getSeq(tree, primates, "Human")

dinaIssakova/rgenesconverged documentation built on Jan. 7, 2020, 4:25 p.m.