rgenesconvergedPlot: rgenesconvergedPlot

In dinaIssakova/rgenesconverged: A Package for Estimating Probability of Convergent Evolution from Genomic Data

Description

Plot tree associated with the given gene, accentuating convergent lineages.

Usage

rgenesconvergedPlot(tree, phydat, spe, pos, th, type = c("abs", "score"))

Arguments

tree	A phylogenetic tree
phydat	An object of class phydat
spe	The name of the species to compare to
pos	The position of interest
th	threshold
type	Type of analysis: 'abs' for basic model or 'score' for by convergence score model

Value

None

Examples

## Not run: 
rgenesconvergedPlot(tree, primates, "Mouse", pos=17, th=3, type="abs")

## End(Not run)

dinaIssakova/rgenesconverged documentation built on Jan. 7, 2020, 4:25 p.m.