entrez_id: Entrez text search with filterability

In dkrozelle/toolboxR: Collection of functions and scripts for bioinformatics.

Description

General purpose function which takes a disorganized list and returns a sorted unique list of values.

Usage

entrez_id(term, field = "All Fields", db = "gene",
  organism = "Homo sapiens", retmax = 1)

Arguments

term	vector search string
field	which field type should the search terms query (https://www.ncbi.nlm.nih.gov/books/NBK49540/)
db	Database to search (gene, protein, etc)
organism	filter for a specific organism

Value

integer vector of entrez ids

Examples

 entrez_id("hsa-let-7a-1")
 entrez_id(c("hsa-let-7a-1", "tp53"))

dkrozelle/toolboxR documentation built on May 15, 2019, 9:13 a.m.