dlindholm/oboe
Open Biomedical Ontology Extraction Tools (oboe)

Package index
Search the dlindholm/oboe package
Functions
6
Source code
7
Man pages
6
Home
/
GitHub
/
dlindholm/oboe
/
read_obo: Read and parse obo (Open Biomedical Ontologies) files

read_obo: Read and parse obo (Open Biomedical Ontologies) files
In dlindholm/oboe: Open Biomedical Ontology Extraction Tools (oboe)

Description Usage Arguments Value Author(s) Examples

Description

Reads and parses obo files.

Usage

1
read_obo(obo_file)

Arguments

obo_file

a character vector pointing to the obo file to read.

Value

Outputs a list of class 'ontology'.

Author(s)

Daniel Lindholm

Examples

1
2
3
4
5
# This example downloads the most recent disease ontology obo file
# and converts it to an R list:

doid <- read_obo("http://purl.obolibrary.org/obo/doid.obo")
head(doid)

dlindholm/oboe documentation built on May 15, 2019, 9:18 a.m.

Related to read_obo in dlindholm/oboe...

dlindholm/oboe index

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close