ReadMRIXML: Reading MRI files in XML Zuerich Format

In dmenne/dmrixml: Zuerich MRI-XML Support and Database Functions

Description

ReadMRIXML reads MRI files in XML format defined by MRIZH.xsd, returning data seperately for each slice. This is a useful format for storing results in a relational database.

ReadMRIXMLxyz reads MRI files in XML format returning voxel values for each x,y,z tuple, for use in displaying 3D.

Usage

ReadMRIXML(mriFile)

Arguments

mriFile

the path of the MRI file in XML format

Details

• Scan: patient initials, number, type...

• Slices: slice information (z)

• Voxels: voxels (x, y, val)

Author(s)

Dieter Menne <[e-mail]>

Examples

mriFile = system.file("extdata", "testMRIZH.xml", package = "Dmrixml")
mri = ReadMRIXML(mriFile)
print(str(mri))
mrixyz = ReadMRIXMLxyz(mriFile)
print(str(mrixyz))

dmenne/dmrixml documentation built on May 15, 2019, 9:32 a.m.