R/RcppExports.R

In donkeyshot/phybreak: Analysis of Outbreaks with Sequence Data

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

.likseq <- function(SNPs, SNPfreqs, nodeparents, nodetimes, mutrate, Nsamples) {
    .Call('_phybreak_likseq', PACKAGE = 'phybreak', SNPs, SNPfreqs, nodeparents, nodetimes, mutrate, Nsamples)
}

.likseqenv <- function(pbenv, nodestochange, tips) {
    .Call('_phybreak_likseqenv', PACKAGE = 'phybreak', pbenv, nodestochange, tips)
}

.mcctree <- function(pars, tims, dims) {
    .Call('_phybreak_CCphylotree', PACKAGE = 'phybreak', pars, tims, dims)
}

.mtcctree <- function(pars, tims, dims) {
    .Call('_phybreak_CCtranstree', PACKAGE = 'phybreak', pars, tims, dims)
}

.ptr <- function(pars, ID) {
    .Call('_phybreak_ptr', PACKAGE = 'phybreak', pars, ID)
}

.sctwh3 <- function(tle) {
    .Call('_phybreak_sctwh3', PACKAGE = 'phybreak', tle)
}