CHANGELOG.md

In dosreislab/simplephy: A simple package for Bayesian phylogenetic analysis

Changelog

Important changes to this project will be documented in this file.

We try to follow Keep a Changelog, and we use Semantic Versioning.

Tags: Added, Changed, Deprecated, Removed, Fixed, Security

[0.2.0] - Development

Added

• Function jc69.rtmcmc to perform mcmc sampling of r and t under JC69. Need to finish documentation.

[0.1.0] - 2019-02-17

Added

• Functions to calculate the JC69 likelihood and posterior in a two-species alignment, when d (the molecular distance) is the parameter to be estimated, and when t, r (the divergence time and molecular rate, with d = 2rt) are the parameters to be estimated.

dosreislab/simplephy documentation built on May 11, 2019, 7:27 p.m.