plot_pvals: Plot the p-value results from topDirs
In dozmorovlab/multiHiCcompare: Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are available
plot_pvals R Documentation
Plot the p-value results from topDirs
Description
Plot the p-value results from topDirs
Usage
plot_pvals(dirs, plot.chr = NA)
Arguments
dirs
The output of the topDirs function when the return_df
option is set to "bed".
plot.chr
A numeric value indicating a specific
chromosome number to subset the plot to. Defaults
to NA indicating that all chromosomes will be plotted.
Value
A plot.
Examples
data('hicexp_diff')
dirs <- topDirs(hicexp_diff, return_df = 'bed')
plot_pvals(dirs)
dozmorovlab/multiHiCcompare documentation built on April 23, 2022, 9:56 a.m.
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| plot_pvals | R Documentation |
Plot the p-value results from topDirs
Description
Plot the p-value results from topDirs
Usage
plot_pvals(dirs, plot.chr = NA)
Arguments
dirs |
The output of the topDirs function when the return_df option is set to "bed". |
plot.chr |
A numeric value indicating a specific chromosome number to subset the plot to. Defaults to NA indicating that all chromosomes will be plotted. |
Value
A plot.
Examples
data('hicexp_diff')
dirs <- topDirs(hicexp_diff, return_df = 'bed')
plot_pvals(dirs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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