API for drake69/semseeker
Stochastic Epigenetic Mutations SEM Seeker
| Global functions | |
|---|---|
| .onLoad | Source code |
| PROBES | Man page |
| PROBES_CHR_CHR | Man page |
| analyze_batch | Source code |
| analyze_population | Man page Source code |
| analyze_single_sample | Man page Source code |
| analyze_single_sample_both | Source code |
| annotate_bed | Man page |
| apply_stat_model | Man page Source code |
| association_analysis | Man page Source code |
| batch_correlation_check | Source code |
| bca_pvalue_for_lqm | Source code |
| beta_save | Source code |
| beta_single_sample | Source code |
| build_data_set_from_geo | Man page Source code |
| close_env | Source code |
| compute_qr_beta_boot_p | Man page Source code |
| compute_quantreg_beta_boot_np | Man page Source code |
| convertTextToNumeric | Source code |
| coverage_analysis | Source code |
| create_excel_pivot | Source code |
| create_heatmap | Man page Source code |
| create_multiple_bed | Source code |
| data_distribution_info | Source code |
| data_preparation | Man page Source code |
| delta_single_sample | Man page |
| deltaq_get | Source code |
| deltar_single_sample | Man page |
| deltarq_get | Source code |
| dir_check_and_create | Man page |
| dump_sample_as_bed_file | Man page Source code |
| file_path_build | Source code |
| get_meth_tech | Source code |
| get_pivot | Source code |
| get_session_info | Source code |
| glm_model | Man page Source code |
| inference_file_name | Source code |
| init_env | Man page Source code |
| lesions_get | Source code |
| manhattan_plot_per_area | Man page Source code |
| mutations_get | Man page Source code |
| pivot_to_long_format | Man page |
| pp_tot | Man page |
| probe_features_get | Source code |
| quantreg_model | Man page Source code |
| quantreg_summary | Man page Source code |
| range_beta_values | Man page Source code |
| read_annotated_bed | Source code |
| read_multiple_bed | Man page Source code |
| sample_group_check | Source code |
| semseeker | Man page Source code |
| sort_by_chr_and_start | Man page Source code |
| test_match_order | Man page Source code |
| test_match_order_by_rownames | Source code |
| test_model | Man page |
| update_session_info | Source code |
| violin_plot_only_significative_areas | Source code |
