pivot_to_long_format: Get the pivot in long format instead of wide format

In drake69/semseeker: Stochastic Epigenetic Mutations SEM Seeker

Get the pivot in long format instead of wide format

Description

Get the pivot in long format instead of wide format

Usage

pivot_to_long_format(
  marker,
  figure,
  group,
  subgroup,
  phenotype_column,
  sample_sheet,
  areas_selection = NULL
)

Arguments

marker	marker to filer HYPER, HYPO, BOTH
figure	DELTAS, DELTAQ,DELTAR, MUTATIONS
group	GENE, DMR ...
subgroup	TSS1500 ...
phenotype_column	column from the sample sheet to pair to each sample
sample_sheet	sample sheet of samples
areas_selection	genomic area to select, if NULL all areas will be selected

Value

the pivot in a long format of 3 columnns, the phontype column with name phenotype, the value of the marker and the area investigated

drake69/semseeker documentation built on Sept. 17, 2023, 12:22 a.m.