R/CpG-data.R

In drmjc/macsR: Facilitate analysis of MACS results.

#' @name CpG.island.data
#' @title CpG islands
#' @rdname CpG.data
#' @description These datasets list the genomic locations of CpG islands from the
#' named species, with coordinates based on the genome build. They are named: \code{Cpg.org.build},
#' eg \code{CpG.human.GRCh37}, or \code{CpG.mouse.NCBI37}
#' 
#' @docType data
#' @keywords datasets
#' 
#' @usage CpG.human.GRCh37
#' @usage CpG.human.NCBI36
#' @usage CpG.human.NCBI35
#' @usage CpG.human.hg17
#' @usage CpG.human.hg18
#' @usage CpG.human.hg19
#' @usage CpG.mouse.NCBI37
#' @usage CpG.mouse.NCBI36
#' @usage CpG.mouse.mm8
#' @usage CpG.mouse.mm9
#' @usage CpG.rat.RGSC3.4
#' @usage CpG.rat.rn4
#' 
#' @aliases CpG pG.human.hg19 CpG.human.hg18 CpG.human.hg17 CpG.mouse.mm9 CpG.mouse.mm8 CpG.rat.rn4 CpG.human.GRCh37 CpG.human.NCBI36 CpG.human.NCBI35 CpG.mouse.NCBI37 CpG.mouse.NCBI36 CpG.rat.RGSC3.4
#' 
#' @format a \code{RangedData} instance, 1 row per CpG island.
#' @source UCSC Table Browser
#' @author Mark Cowley, 2012-03-05
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