| add_columns-methods | Add columns to a 'data.frame' or 'matrix' |
| add_repository | point R to an additional package repository |
| alleq | Are all values equal? |
| binary.swap | swap the 1's and 0's around |
| cat.matrix | Print a matrix to stdout. |
| cbind.list | column bind the elements in a list together. |
| cbind.smart | A smarter cbind |
| choose.pairs | all pairwise combinations from n |
| choose.trios | all unique combinations of 3 elements from n |
| clean.tempdir | Function to delete all of the files in the tempdir. |
| cm2inch | Convert centimetres to inches |
| colapply | apply FUN to columns |
| colclasses | Get/set the column classes of matrix-like data |
| collapse.rows | collapse rows |
| collate | collate data together |
| colMax | column-wise maximum |
| colMin | column-wise minimum |
| colSD | Standard deviation of each column |
| column2rownames | move columns/rows to col/rownames & back again |
| count.na | count the number of NA's |
| count.null | count the number of NULL's |
| crossplatform.unzip | Unzip a zip archive file Unzip a zip archive file,... |
| debug2 | Debug a function, controlled by a boolean |
| density_tri | density triangles |
| dir.Rdata | dir listing of R data objects |
| dir.remove | Remove directories that are not empty. |
| dir.same | Are 2 directories the same? |
| dir.size | directory size This determines the size of a directory by... |
| dir.sort | sort files in a directory numerically |
| dRange | What is the delta-range, ie the distance between min and max? |
| duplicate.indices | For all of the duplicates in x, return the indices for each... |
| even | Check whether a vector or matrix of numbers are even. |
| file.gunzip | gunzip a file. |
| file.gzip | gzip a file. |
| file.isgzip | Is the file a gzip file? |
| file.issymlink | is the file a symbolic link? |
| file.move | move files into a directory |
| file.numlines | number of lines in a txt file |
| ftpdir | directory listing of an FTP directory. |
| get.char | get a specific character from a word |
| get.full.path | Expand a file path to an absolute path |
| has.names | does the object have names? |
| interleave.columns | interleave the columns from multiple tables |
| intersectN | Intersection of multiple vectors This function extends... |
| is.alnum | is alphanumeric? |
| is.alpha | is alphabetical? |
| is.dir | Is the given path a file or directory? |
| is.int | Checks which elements of a vector are integers. |
| isMac | isMac |
| is.matrix.like | is x a 'matrix' or 'data.frame'? |
| is.sorted | Test if an Object is Sorted |
| is.unique | are the elements in x all unique? |
| is.url | Which entries are URL's. |
| isWindows | isWindows |
| keyval2hashtable | Convert a vector of keys and values to a hashtable Take a... |
| lbind | Bind any number of lists together Bind the elements within N... |
| lgrep | grep for a pattern in a list of values. |
| list2adjmat | Convert a list to an adjacency matrix |
| list2df | Convert list of vectors to data.frame |
| list2RscriptArgs | convert a named list of name=value pairs into properly quoted... |
| load.dir | load.dir |
| lookUp | generic key lookUp Generic function to look up keys in a... |
| merge_tsv | merge tsv files |
| mgrep | multi-grep methods |
| midpoints | Determine the midpoints between a vector of numbers |
| mjcbase-package | mjcbase |
| mkdir | Manipulaton of Directories and File Permissions |
| move.column | Reorder a column, or block of columns from within a... |
| na.rm | remove the 'NA's from a vector |
| odd | Check whether a vector or matrix of numbers are odd. |
| one2many | convert one2many and many2one |
| pad | Pad a number with leading zeros |
| padNA | make a ragged list uniform in length |
| paste0 | Concatenate strings |
| pbcopy | Write a vector to the OSX clipboard |
| pbpaste | Paste the OSX clipboard into a character vector |
| peek | A function to show first 5 rows and col of data |
| percentile | percentile & quartile |
| perl.oneliner | execute a perl one liner |
| pkgrep | find matching package names using grep |
| prettyNum | prettyNum for matrices and tables |
| print.venn | A printed representation of a 2D venn diagram |
| pwd | Wrapper for getwd() |
| qn | Quick quit. |
| range_merge | merge a set of numbers into a range. |
| rbind.list | rbind the elements in a list together. |
| rbind.smart | A smarter rbind 'rbind' 2 matrix-like-objects even if they... |
| readLine | readLine, and split on character |
| read.table.fast | read.delim fast, on a subset of columns |
| read.table.wide | Read a very wide table (ie many columns) into a data.frame |
| recycle | Variable recycler |
| rename.column | Rename column(s) within a table. |
| replace.cells | replace the values in a table |
| rep_list | repeat x N times to make an N element list |
| rm.na | remove NA's from an object |
| rot | Rotate values |
| rowapply | apply FUN to rows |
| rowMAD | Apply the mad function to each row of a matrix-like object |
| rowMax | row-wise maximum |
| rowMedian | What is the median in each row? |
| rowMin | row-wise minimum |
| rowPaste | Convert rows in a table to a character vector, where each... |
| rowRange | What is the range of values in each row? |
| rowSD | Standard deviation of each row |
| rowVar | Variance of each row |
| scale2 | Function to linearly scale a vector of numbers (x) to be... |
| scan.text | scan.text |
| setwidth | set the width of the current display set the width of the... |
| skipLine | skipLine |
| sort-methods | sorting or ordering more complex objects |
| sortnum | sort numerically |
| sort_pattern | pattern sorting a vector |
| sourcedir | source all the .R files in a directory |
| sourcelog | Source all of the functions that are in a log file |
| split_into_batches | split x into N batches each of a specific size. |
| squashWarnings | Catch any warnings & convert them to messages |
| stratify-methods | stratify |
| strcat | concatenate a bunch of strings |
| str_ends | From a character vector of length >= 1, determine the first... |
| strip.fileextension | Strip the file extension Strip the three letter file... |
| strlen | Length of each string in a vector. |
| subdirs.same | Are the subdirs that are named to same actually identical |
| sunique | sort and uniquify a vector |
| suppressWarnings2 | Warning messages |
| symmetricise | Make a pair symmetrical Convert a vector of 2 values into... |
| Sys.grepline | Which lines do various patterns exist on? |
| table2hashtable | Convert a table to a hashtable Take a table with a... |
| threshold.distance.matrix | threshold a distance matrix |
| time_diff | Determines the difference between two time points generated... |
| to.alnum | convert to alphanumeric |
| to.char.array | convert a word into a character vector |
| tocsv | Convert a vector x into a comma separated character(1). |
| trim | Trim the whitespace from front and back of the words in a... |
| trunc | truncate the values in a vector |
| twodmatch | Extension of '%in%' for value matching in 1D or 2D objects |
| ucounts | How many times does each term in x appear? |
| uncsv | uncsv |
| unduplicate | unduplicate elements in a vector |
| unionN | Union of 2 or more vectors |
| vecmerge | Merge a vector and a data.frame |
| vector2hashtable | Convert a vector to a hashtable Take a vector of words, and... |
| which.2D | which.2D |
| whichN | whichN |
| which.percentile | For a numeric vector x, return which percentile each data... |
| which.quartile | For a numeric vector x, return which quartile each data point... |
| write.delim | Write a matrix-like object as a tab-delimited txt file. |
| write.delim.list | Export a list of single tables into the same tab delimited... |
| writeLines.list | Write a list of vectors out to a file |
| write.venn.2D.xls | Write a 2D Venn diagram to an Excel file |
| write.venn.3D.xls | Write a 3D Venn diagram to an Excel file. Compare 3 vectors,... |
| zeros-ones | Matlab wrappers |
| zip | Create a zip archive. |
| zipdir | zip the contents of a directory. |
