Files in drostlab/edgynode
Comparison of Gene Regulatory Networks

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inst/.DS_Store

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inst/beeline_examples/GENIE3/.DS_Store

inst/beeline_examples/GENIE3/outFile.csv

inst/beeline_examples/GRISLI/outFile.txt

inst/beeline_examples/GRNBOOST2/time.txt

inst/beeline_examples/GRNVBEM/outFile0.txt

inst/beeline_examples/GRNVBEM/outFile1.txt

inst/beeline_examples/GRNVBEM/rankedEdges.csv

inst/beeline_examples/GRNVBEM/time0.txt

inst/beeline_examples/GRNVBEM/time1.txt

inst/beeline_examples/LEAP/leap_results.csv

inst/beeline_examples/LEAP/outFile0.txt

inst/beeline_examples/LEAP/outFile1.txt

inst/beeline_examples/LEAP/time0.txt

inst/beeline_examples/LEAP/time1.txt

inst/beeline_examples/PIDC/outFile.txt

inst/beeline_examples/PIDC/rankedEdges.csv

inst/beeline_examples/PIDC/time.txt

inst/beeline_examples/PPCOR/outFile.txt

inst/beeline_examples/PPCOR/time.txt

inst/data/network_noNoiseCM_qnorm_49_placenta_development.csv

inst/data/network_noNoiseCM_raw_49_placenta_development.csv

inst/data/network_qnorm_49_placenta_development.csv

inst/data/network_raw_49_placenta_development.csv

man/.DS_Store

man/assert_adjacency.Rd man/convert_adj_to_edges.Rd man/convert_adj_to_igraph.Rd man/convert_adj_to_matrix.Rd man/convert_edges_to_adj.Rd

man/figures/.DS_Store

man/figures/Example_Fig1.png

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man/import_genie3.Rd man/is_adjacency.Rd man/is_binary.Rd man/is_standard.Rd man/is_symmetric.Rd man/make_adjacency.Rd man/make_binary.Rd man/make_standard.Rd man/make_symmetric.Rd man/metric_dist_delta_con.Rd man/network_benchmark_noise_filtering.Rd man/network_benchmark_noise_filtering_test.Rd man/network_dist_pairwise_genes.Rd man/network_filter_edges.Rd man/network_make_binary.Rd man/network_rescale.Rd man/plot_filtering_network_weight_distribution.Rd man/ppcor.Rd man/summary_centrality_alpha.Rd man/summary_centrality_harmonic.Rd man/summary_centrality_kleinberg.Rd man/summary_centrality_subgraph.Rd man/summary_delta_con_similarity.Rd

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tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test-genie.R tests/testthat/test-is_adjacency.R tests/testthat/test-is_symmetric.R tests/testthat/test-network_compare.R tests/testthat/test-network_make_binary.R tests/testthat/test-network_rescale.R tests/testthat/test-network_statistics.R tests/testthat/test-pidc.R tests/testthat/test-ppcor.R vignettes/Introduction.Rmd

drostlab/edgynode documentation built on March 29, 2024, 10:36 a.m.

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drostlab/edgynode
Comparison of Gene Regulatory Networks

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Comparison of Gene Regulatory Networks

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Comparison of Gene Regulatory Networks

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Comparison of Gene Regulatory Networks