oasisad_pre: OASISAD image preprocessing function

In dty0606/oasisad: 'OASISAD' an Improved Automated White Matter Hyper-intensity Classficiation Tool

Description

MRI image data preprocessing with multiple inputs

Usage

oasisad_pre(
  flair,
  t1,
  t2 = NULL,
  pd = NULL,
  img_space = NULL,
  brain_mask = NULL,
  segmentation = FALSE,
  dir = NULL,
  cores = 1,
  verbose = NULL
)

Arguments

flair	Input FLAIR image
t1	Input T1 image
t2	Input T2 image
pd	Input PD image
img_space	An image to register and use for creating brain mask if needed. If NULL, 'flair' image will be used in registration.
brain_mask	Input brain_mask, if null, a mask will be obtained by FSL
segmentation	A boolean indicates whether using bias_correct for segmentation
dir	A user defined output path for fslr segmentation
cores	A number indicates how many cores used mclapply
verbose	A boolean indicated whether output messages

Value

preprocessed image data

dty0606/oasisad documentation built on March 8, 2020, 11:18 p.m.