frequency_matrix: Create a matrix of allele frequencies for a single locus...
In dyerlab/gstudio: Tools Related to the Spatial Analysis of Genetic Marker Data
View source: R/frequency_matrix.R
frequency_matrix R Documentation
Create a matrix of allele frequencies for a single locus across many strata
Description
This is a quick translation of locus data to a tabular stratum format.
Usage
frequency_matrix(x, stratum = "Population", loci = NULL)
Arguments
x
A data.frame with locus and strata column(s)
stratum
The column name to use as the partitioning
loci
The name of the locus to use
Value
A matrix (rows are strata, columns are alleles) of allele frequencies
Note
This function just reshapes the data.frame from frequencies.
Author(s)
Rodney J. Dyer rjdyer@vcu.edu
dyerlab/gstudio documentation built on Feb. 2, 2024, 8:24 p.m.
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View source: R/frequency_matrix.R
| frequency_matrix | R Documentation |
Create a matrix of allele frequencies for a single locus across many strata
Description
This is a quick translation of locus data to a tabular stratum format.
Usage
frequency_matrix(x, stratum = "Population", loci = NULL)
Arguments
x |
A |
stratum |
The column name to use as the partitioning |
loci |
The name of the locus to use |
Value
A matrix (rows are strata, columns are alleles) of allele frequencies
Note
This function just reshapes the data.frame from frequencies.
Author(s)
Rodney J. Dyer rjdyer@vcu.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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