query_snaptron_samples: Query samples using snaptron

In dzhang32/snaptronr: Queries snaptron database for details of junctions

Description

query_snaptron_samples find the metadata for the samples of interest

Usage

query_snaptron_samples(database, sample_info)

Arguments

database	Character scalar. Database of junctions - "srav1", "srav2", "gtex"
sample_info	either df outputed from query_snaptron_junc or integer vector of rail ids or list of integer vectors of rail ids

Value

list containing df, with each element correponding to sample metadata for 1 junction

See Also

For more details on input and output parameters see: http://snaptron.cs.jhu.edu/reftables.html

Sample metadata downloaded from http://snaptron.cs.jhu.edu/data/

Examples

query_snaptron_samples(database = "srav2", sample_info = c(1,2))
query_snaptron_samples(database = "srav2", sample_info = list(c(1, 2), c(3, 4)))
query_snaptron_samples(database = "srav2", sample_info = query_snaptron_junc_output)

dzhang32/snaptronr documentation built on May 16, 2019, 4:07 a.m.