Man pages for eachanjohnson/concensusGLM
concensusGLM
| analyze | Run concensusGLM analysis |
| callHits | Call hits based on p-value and resampled data |
| clean | Clean up ConcensusGLM data |
| concensusDataSetFromFile | Set up analysis container for ConcensusGLM |
| directoryTree | Set up a directory tree for ConcensusGLM |
| execute.concensusWorkflow | Execute concensusWorkflow |
| gather.concensusWorkflow | Gather concensusWorkflow |
| getBatchEffects | Get experimental batch effects |
| getFinalDispersions | Estimate Negative Binomial dispersion paramteter taking into... |
| getFinalModel | Fit final model |
| getRoughDispersions | Get rough Negative Binomial dispersion parameters |
| newConcensusDataSet | Set up analysis container for ConcensusGLM |
| print.concensusDataSet | Print ConcensusDataSet |
| print.concensusWorkflow | Print ConcensusWorkflow |
| resample | Make fake data from resampled controls |
| scatter.concensusWorkflow | Scatter concensusWorkflow |
| View_c | Invoke a Data Viewer for concensus objects |
| write_concensusDataSet | Write ConcensusDataSet to disk |
| write_plaintext | Write ConcensusGLM data as plain text |
