getIdLevelQvals: Calculates identification level q-values based on...
In eahrne/SafeQuant: A Toolbox for the Analysis of Proteomics Data
Description
Usage
Arguments
Details
Value
Note
References
Examples
View source: R/IdentificationAnalysis.R
Description
Calculates identification level q-values based on target-decoy score distributions
Usage
1
getIdLevelQvals(scores, isDecoy)
Arguments
scores
peptide/protein identficationscore
isDecoy
vector of TRUE/FALSE
Details
q-value = (Nb. Decoy Entries at idScore Threshold S*) / (Nb. Target Entries at idScore Threshold S). (* idScore >= S)
Value
vector of q.values
Note
No note
References
NA
Examples
1
print("No examples")
eahrne/SafeQuant documentation built on April 8, 2021, 10:10 a.m.
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Description Usage Arguments Details Value Note References Examples
View source: R/IdentificationAnalysis.R
Description
Calculates identification level q-values based on target-decoy score distributions
Usage
1 | getIdLevelQvals(scores, isDecoy)
|
Arguments
scores |
peptide/protein identficationscore |
isDecoy |
vector of TRUE/FALSE |
Details
q-value = (Nb. Decoy Entries at idScore Threshold S*) / (Nb. Target Entries at idScore Threshold S). (* idScore >= S)
Value
vector of q.values
Note
No note
References
NA
Examples
1 | print("No examples")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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