API for ebi-gene-expression-group/bioconductor-ExpressionAtlas
Search, download and visualise datasets from EMBL-EBI Expression Atlas and Single-Cell Expression Atlas
| Global functions | |
|---|---|
| .downloadTabularFile | Source code |
| .downloadXMLFile | Source code |
| .download_anndata_with_retry | Source code |
| .flatten_experiment | Source code |
| .getExperimentType | Source code |
| .isValidExperimentAccession | Source code |
| .sanitize_filename | Source code |
| .search_gxa_experiments_yaml | Source code |
| allExps | Man page |
| atlasRes | Man page |
| dotPlotSCAtlasExperiment | Man page Source code |
| getAnalysticsDifferentialAtlasExpression | Man page Source code |
| getAtlasData | Man page Source code |
| getAtlasExperiment | Man page Source code |
| getAtlasSCExperiment | Man page Source code |
| getEligibleAtlasExperiment | Source code |
| getNormalisedAtlasExpression | Man page Source code |
| heatmapAtlasExperiment | Man page Source code |
| heatmapSCAtlasExperiment | Man page Source code |
| plotDimRedSCAtlasExperiment | Man page Source code |
| rnaseqExps | Man page |
| searchAtlasExperiments | Man page Source code |
| searchSCAtlasExperiments | Man page Source code |
| volcanoDifferentialAtlasExperiment | Man page Source code |
