Files in ecell/transomics2cytoscape
A tool set for 3D Trans-Omic network visualization with Cytoscape
.Rbuildignore
.gitignore
DESCRIPTION
INSTALL
NAMESPACE
NEWS
R/transomics2cytoscape.R
README.md
inst/extdata/transomics.xml
inst/extdata/usecase1/allosteric_ec2rea.tsv
inst/extdata/usecase1/allosteric_ecnumber.tsv
inst/extdata/usecase1/k2e.tsv
inst/extdata/usecase1/usecase1.cys
inst/extdata/usecase1/yugi2014.tsv
inst/extdata/usecase1/yugi2014.xml
inst/extdata/usecase2/Kokaji2020styles.xml
inst/extdata/usecase2/TFs.sif
inst/extdata/usecase2/description_of_usecase2_data.md
inst/extdata/usecase2/e2r_updated.tsv
inst/extdata/usecase2/kokaji2020.tsv
inst/extdata/usecase2/m2r_updated.tsv
inst/extdata/usecase2/s2t_name_updated.tsv
inst/extdata/usecase2/t2e_name_updated.tsv
inst/extdata/usecase2/usecase2_2022-10-24.pdf
inst/unitTests/test-all.R
inst/unitTests/testthat/test-alltable.R
inst/unitTests/testthat/test-eachtable.R
man/create3Dnetwork.Rd
man/createTransomicEdges.Rd
man/ec2reaction.Rd
man/figures/4layers.jpg
man/figures/Transomic_interaction_file.png
man/figures/ec2reaction.png
man/figures/importAsCy3D.jpg
man/figures/importCyjs.jpg
man/figures/importNetwork.jpg
man/figures/kokaji2020.png
man/figures/workflow_diagram.png
man/figures/yugi2014.png
man/installCyApps.Rd
tests/runTests.R
vignettes/biometrics.csl
vignettes/references.bib
vignettes/transomics2cytoscape.Rmd
