get_samples: Extract sample metadata from an agglomerated dataframe
In eclarke/metaglomr: Tools for tidy metagenomics
Description
Usage
Arguments
Value
Description
Extract sample metadata from an agglomerated dataframe
Usage
1
get_samples(agg, sample_col, ...)
Arguments
agg
agglomerated dataframe
sample_col
unquoted name of the sample id column
...
unquoted names of the taxonomic ranks (i.e. Kingdom:Species)
otu_col
unquoted name of the otu id column
count_col
unquoted name of the count column
Value
the sample metadata, deduplicated
eclarke/metaglomr documentation built on May 30, 2019, 12:46 p.m.
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Description Usage Arguments Value
Description
Extract sample metadata from an agglomerated dataframe
Usage
1 | get_samples(agg, sample_col, ...)
|
Arguments
agg |
agglomerated dataframe |
sample_col |
unquoted name of the sample id column |
... |
unquoted names of the taxonomic ranks (i.e. Kingdom:Species) |
otu_col |
unquoted name of the otu id column |
count_col |
unquoted name of the count column |
Value
the sample metadata, deduplicated
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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