Files in ecohealthalliance/metaflu
Functions for Avian Influenza Metapopulation Simulation

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/RcppExports.R R/metaflu-package.R R/network_functions.R R/simulate.R R/summarizing_functions.R R/visualization_functions.R README.Rmd README.md
docs/src/contrib/PACKAGES
docs/src/contrib/PACKAGES.gz
docs/src/contrib/metaflu_0.1.0.tar.gz
inst/deploy_pages.sh
man/create_summary_df.Rd man/get_all_sims.Rd man/get_depth2_spread.Rd man/get_duration_array.Rd man/get_exposure.Rd man/get_exposure_fraction.Rd man/get_failure_array.Rd man/get_farm_culls.Rd man/get_infectious_array.Rd man/get_n_spread.Rd man/get_number_farms.Rd man/get_proportion_loss.Rd man/get_recovered_array.Rd man/get_susceptibles_array.Rd man/make_graphs.Rd man/metaflu.Rd man/mf_sim.Rd man/proportion_failed.Rd man/reduce_epi_array.Rd man/vary_params.Rd man/vary_params_2d.Rd
metaflu.Rproj
src/.gitignore
src/RcppExports.cpp
src/data_structures.h
src/gillespie.cpp
src/includes.h
src/rates.h
tests/testthat.R
tests/testthat/stored_sim_results.rds
tests/testthat/test_culling.R tests/testthat/test_reproducibility.R
vignettes/.culling_research.Rmd.swp
vignettes/2016-10-08-design_notes.md vignettes/2016-10-13-first-test.Rmd vignettes/2016-12-01-figure-experiments.Rmd vignettes/README.md vignettes/culling_research.Rmd
vignettes/culling_research.html
vignettes/elsevier-with-titles.csl
vignettes/fig2results.rds
vignettes/growth-scenario.R vignettes/models.Rmd
vignettes/models.html
vignettes/models.md vignettes/notebook-template.Rmd
vignettes/notebook-template.html
vignettes/parameters.Rmd
vignettes/parameters.html
vignettes/parameters.md vignettes/poultry_worker_risk.Rmd
vignettes/poultry_worker_risk.html
vignettes/poultry_worker_risk.md
vignettes/references.bib
vignettes/reproduce-paper.Rmd vignettes/wild_bird_ecology.Rmd
vignettes/wild_bird_ecology.html
vignettes/wild_bird_ecology.md
ecohealthalliance/metaflu documentation built on Sept. 27, 2017, 1:26 a.m.