writeResultsToFile: Save DM output.
In eeholmes/DM: Dynamic Model
Description
Usage
Arguments
Value
Description
Write DM output (posteriors) to csv file and RData file.
Usage
1
writeResultsToFile(input, dat, tDat, mlEst, bdat, plist, filename)
Arguments
input
a list with the other values needed for a DM run. The following are the defaults used, but can be passed in to specify something different: naturalMort = c(0.5,0.4,0.3,0.2,0.1,0), analysisType = "DM", SRfunction = "ricker", covariates = "no", includeMarineSurvival = "no", includeFlow = "no"
dat
data from the A & P file
tDat
a data frame of the posteriors and calculated process error and Smsy for each draw. From calculatePEandSmsy().
mlEst
The maximum likelihood estimate for the four SR parameters
bdat
data for the bayesian specification of a DM run
filename
name to give the outputfiles file
population
Name of the population.
Value
nothing is returned but the csv and RData files are written.
eeholmes/DM documentation built on May 26, 2019, 3:36 p.m.
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Description Usage Arguments Value
Description
Write DM output (posteriors) to csv file and RData file.
Usage
1 | writeResultsToFile(input, dat, tDat, mlEst, bdat, plist, filename)
|
Arguments
input |
a list with the other values needed for a DM run. The following are the defaults used, but can be passed in to specify something different: naturalMort = c(0.5,0.4,0.3,0.2,0.1,0), analysisType = "DM", SRfunction = "ricker", covariates = "no", includeMarineSurvival = "no", includeFlow = "no" |
dat |
data from the A & P file |
tDat |
a data frame of the posteriors and calculated process error and Smsy for each draw. From calculatePEandSmsy(). |
mlEst |
The maximum likelihood estimate for the four SR parameters |
bdat |
data for the bayesian specification of a DM run |
filename |
name to give the outputfiles file |
population |
Name of the population. |
Value
nothing is returned but the csv and RData files are written.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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